Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase maturation protein | SAMEA3472114_04001 | Not Available | Negative | 4092394 - 4092804 | 15465.5 |
| formate hydrogenlyase subunit 7 | SAMEA3472114_04002 | Not Available | Negative | 4092801 - 4093568 | 27999.7 |
| formate hydrogenlyase subunit 6 | SAMEA3472114_04003 | Not Available | Negative | 4093568 - 4094110 | 20330.4 |
| formate hydrogenlyase subunit e | SAMEA3472114_04004 | Not Available | Negative | 4094120 - 4095829 | 64970.1 |
| formate hydrogenlyase subunit 4 | SAMEA3472114_04005 | Not Available | Negative | 4095847 - 4096770 | 33065.4 |
| formate hydrogenlyase subunit 3 | SAMEA3472114_04006 | Not Available | Negative | 4096773 - 4098599 | 64079.2 |
| formate hydrogenlyase subunit 2 | SAMEA3472114_04007 | Not Available | Negative | 4098596 - 4099207 | 21874.4 |
| formate hydrogenlyase regulatory protein | SAMEA3472114_04008 | Not Available | Negative | 4099332 - 4099793 | 17627.9 |
| hydrogenase nickel incorporation protein | SAMEA3472114_04009 | Not Available | Positive | 4100005 - 4100355 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein | SAMEA3472114_04010 | Not Available | Positive | 4100359 - 4101231 | 31580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





