Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose:(heptosyl) lps alpha-1,3-glucosyltransferase | SAMEA3472114_03761 | Not Available | Positive | 3858475 - 3859599 | 42530.6 |
| kinase that phosphorylates core heptose of lipopolysaccharide | SAMEA3472114_03762 | Not Available | Positive | 3859592 - 3860389 | 31053.1 |
| udp-glucose:(glucosyl) lps alpha1,3-glucosyltransferase waao | SAMEA3472114_03763 | Not Available | Positive | 3860405 - 3861421 | 38773.8 |
| udp-galactose:(glucosyl) lps alpha1,2-galactosyltransferase waat | SAMEA3472114_03764 | Not Available | Positive | 3861438 - 3862433 | 38520.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3472114_03765 | Not Available | Positive | 3862443 - 3863135 | 26995.8 |
| udp-galactose:(galactosyl) lps alpha1,2-galactosyltransferase waaw | SAMEA3472114_03766 | Not Available | Positive | 3863161 - 3864186 | 39332.8 |
| beta1,3-glucosyltransferase waav | SAMEA3472114_03767 | Not Available | Positive | 3864271 - 3865254 | 38659.2 |
| lipid a-core:surface polymer ligase waal | SAMEA3472114_03768 | Not Available | Positive | 3865300 - 3866553 | 46899.5 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3472114_03769 | Not Available | Negative | 3866623 - 3867594 | 35906.1 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3472114_03770 | Not Available | Negative | 3867598 - 3868644 | 39014.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





