Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative prophage protein | SAMEA3472114_04652 | Not Available | Negative | 4765972 - 4766100 | 4688.29 |
| Hypothetical protein | SAMEA3472114_04653 | Not Available | Negative | 4766102 - 4766338 | 8398.75 |
| Regulatory protein ci | SAMEA3472114_04654 | Not Available | Negative | 4766555 - 4766974 | 16166.3 |
| Regulatory protein cro | SAMEA3472114_04655 | Not Available | Positive | 4767054 - 4767308 | 9211.13 |
| Cii protein | SAMEA3472114_04656 | Not Available | Positive | 4767305 - 4767730 | 15881.2 |
| Replication endonuclease | SAMEA3472114_05145 | Not Available | Positive | 5209191 - 5209856 | 25155.8 |
| Recombinase | SAMEA3472114_05146 | Not Available | Positive | 5209933 - 5210892 | 34953.7 |
| Plasmid partitioning/stability family protein | SAMEA3472114_05147 | Not Available | Positive | 5210897 - 5211211 | 11623.1 |
| Valyl-trna synthetase | SAMEA3472114_05148 | Not Available | Positive | 5211226 - 5211513 | 10905.0 |
| Hypothetical protein | SAMEA3472114_05149 | Not Available | Positive | 5211528 - 5211884 | 13098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





