Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion protein | SAMEA3472114_03750 | Not Available | Negative | 3850457 - 3851053 | 22837.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3472114_03751 | Not Available | Negative | 3851160 - 3851618 | 16288.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | SAMEA3472114_03752 | Not Available | Negative | 3851596 - 3852816 | 43533.8 |
| dna repair protein radc | SAMEA3472114_03753 | Not Available | Positive | 3852988 - 3853656 | 25259.9 |
| 50s ribosomal protein l28 | SAMEA3472114_03754 | Not Available | Positive | 3853873 - 3854109 | 9007.02 |
| 50s ribosomal protein l33 | SAMEA3472114_03755 | Not Available | Positive | 3854130 - 3854297 | 6371.94 |
| formamidopyrimidine-dna glycosylase | SAMEA3472114_03756 | Not Available | Positive | 3854395 - 3855204 | 30261.8 |
| phosphopantetheine adenylyltransferase | SAMEA3472114_03757 | Not Available | Negative | 3855243 - 3855722 | 17837.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3472114_03758 | Not Available | Negative | 3855730 - 3857007 | 47293.9 |
| lipopolysaccharide core biosynthesis protein | SAMEA3472114_03760 | Not Available | Positive | 3857420 - 3858478 | 39448.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





