Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdk activating kinase (cak)/rna polymerase ii transcription initiation/nucleotide excision repair factor tfiih/tfiik, cyclin h subunit | SAMEA3472114_03672 | Not Available | Positive | 3772525 - 3774339 | 67860.2 |
| dihydrolipoamide dehydrogenase | SAMEA3472114_03673 | Not Available | Negative | 3774410 - 3775834 | 50691.4 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3472114_03674 | Not Available | Negative | 3776042 - 3777934 | 66099.8 |
| pyruvate dehydrogenase e1 component | SAMEA3472114_03675 | Not Available | Negative | 3777949 - 3780612 | 99674.1 |
| transcriptional regulator protein | SAMEA3472114_03677 | Not Available | Negative | 3780773 - 3781537 | 29427.2 |
| aromatic amino acid transport protein | SAMEA3472114_03678 | Not Available | Positive | 3782081 - 3783451 | 49561.9 |
| ampe protein | SAMEA3472114_03679 | Not Available | Negative | 3783494 - 3784348 | 32123.9 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3472114_03680 | Not Available | Negative | 3784345 - 3784896 | 20537.2 |
| quinolinate phosphoribosyltransferase | SAMEA3472114_03681 | Not Available | Positive | 3784984 - 3785877 | 32764.0 |
| prepilin peptidase dependent protein d precursor | SAMEA3472114_03682 | Not Available | Positive | 3786080 - 3786520 | 15603.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





