Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | SAMEA3472114_04640 | Not Available | Negative | 4759426 - 4759587 | 5823.09 |
| Trna,type:asn,anti_codon:gtt; | Not Available | Not Available | Positive | 4759749 - 4759824 | Not Available |
| dgsa anti-repressor mtfa | SAMEA3472114_04642 | Not Available | Negative | 4759925 - 4760722 | 30224.6 |
| Trna,type:ser,anti_codon:cga; | Not Available | Not Available | Positive | 4760816 - 4760905 | Not Available |
| Integrase protein | SAMEA3472114_04644 | Not Available | Negative | 4760958 - 4761983 | 39288.1 |
| Hypothetical protein | SAMEA3472114_04645 | Not Available | Negative | 4761983 - 4762186 | 7676.3 |
| Exodeoxyribonuclease viii | SAMEA3472114_04646 | Not Available | Negative | 4762245 - 4764686 | 90452.1 |
| putative prophage protein | SAMEA3472114_04647 | Not Available | Negative | 4764780 - 4764971 | 6837.33 |
| division inhibition protein dicb | SAMEA3472114_04648 | Not Available | Negative | 4764968 - 4765156 | 6959.68 |
| putative prophage protein | SAMEA3472114_04651 | Not Available | Negative | 4765724 - 4765942 | 8393.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





