Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472114_03549 | Not Available | Positive | 3646627 - 3647832 | 44461.5 |
| sira family protein | SAMEA3472114_03550 | Not Available | Positive | 3647829 - 3648062 | 8653.53 |
| uncharacterised acr, cog2135 | SAMEA3472114_03551 | Not Available | Positive | 3648171 - 3648839 | 25023.6 |
| flagellar hook-basal body complex protein flie | SAMEA3472114_03552 | Not Available | Negative | 3649232 - 3649546 | 11127.5 |
| flagellar m-ring protein | SAMEA3472114_03553 | Not Available | Positive | 3649761 - 3651419 | 60583.6 |
| flagellar motor switch protein flig | SAMEA3472114_03554 | Not Available | Positive | 3651412 - 3652407 | 36778.2 |
| flagellar assembly protein h | SAMEA3472114_03555 | Not Available | Positive | 3652400 - 3653086 | 25084.6 |
| flagellum-specific atp synthase | SAMEA3472114_03556 | Not Available | Positive | 3653086 - 3654459 | 49318.6 |
| flagellar protein flij | SAMEA3472114_03557 | Not Available | Positive | 3654478 - 3654921 | 17325.6 |
| flagellar hook-length control protein | SAMEA3472114_03558 | Not Available | Positive | 3654918 - 3656045 | 39238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





