Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Partition protein parb | SAMEA3472114_04591 | Not Available | Negative | 4693461 - 4694462 | 37427.9 |
| Partition protein para | SAMEA3472114_04592 | Not Available | Negative | 4694479 - 4695675 | 44224.0 |
| Hypothetical protein | SAMEA3472114_04593 | Not Available | Negative | 4696126 - 4696653 | 19898.9 |
| Initiator replication family protein | SAMEA3472114_04594 | Not Available | Negative | 4696946 - 4697830 | 33192.0 |
| Conserved protein of unknown function upfa | SAMEA3472114_04595 | Not Available | Negative | 4698165 - 4698557 | 14790.3 |
| Outer membrane lytic protein | SAMEA3472114_04596 | Not Available | Negative | 4698735 - 4699157 | 15784.9 |
| Abc transporter | SAMEA3472114_04636 | Not Available | Positive | 4754071 - 4755873 | 66451.4 |
| yersiniabactin-iron transporter permease ybtx | SAMEA3472114_04637 | Not Available | Positive | 4755866 - 4757146 | 44958.6 |
| putative chorismate binding protein | SAMEA3472114_04638 | Not Available | Positive | 4757174 - 4758478 | 48036.5 |
| Prophage p4 integrase | SAMEA3472114_04639 | Not Available | Negative | 4758672 - 4759421 | 28655.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





