Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_03509 | Not Available | Negative | 3609163 - 3609396 | 8857.33 |
| putative hydrolase | SAMEA3472114_03510 | Not Available | Negative | 3609434 - 3610198 | 29685.3 |
| putative type i restriction enzyme hsdr protein | SAMEA3472114_03511 | Not Available | Negative | 3610195 - 3613479 | 123904.0 |
| putative restriction-modification dna specificity domain protein | SAMEA3472114_03512 | Not Available | Negative | 3613501 - 3614727 | 45390.1 |
| putative type i methylase | SAMEA3472114_03513 | Not Available | Negative | 3614717 - 3616240 | 57179.7 |
| uncharacterised protein | SAMEA3472114_03514 | Not Available | Positive | 3616549 - 3617691 | 44288.4 |
| phage integrase | SAMEA3472114_03515 | Not Available | Positive | 3617840 - 3618976 | 43415.7 |
| helix-turn-helix domain | SAMEA3472114_03516 | Not Available | Positive | 3619119 - 3619319 | 7627.15 |
| uncharacterised protein | SAMEA3472114_03517 | Not Available | Positive | 3619309 - 3619947 | 23774.5 |
| putative dna-directed dna polymerase | SAMEA3472114_03518 | Not Available | Positive | 3619994 - 3622594 | 97763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





