Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction atp-dependent dna helicase | SAMEA3472114_03458 | Not Available | Negative | 3557210 - 3558220 | 37176.0 |
| holliday junction atp-dependent dna helicase | SAMEA3472114_03459 | Not Available | Negative | 3558229 - 3558840 | 22086.0 |
| protein | SAMEA3472114_03460 | Not Available | Positive | 3559115 - 3559717 | 22633.1 |
| holliday junction resolvase | SAMEA3472114_03461 | Not Available | Negative | 3559719 - 3560240 | 18747.9 |
| yebc/pmpr family dna-binding regulatory protein | SAMEA3472114_03462 | Not Available | Negative | 3560275 - 3561015 | 26424.0 |
| datp pyrophosphohydrolase | SAMEA3472114_03463 | Not Available | Negative | 3561044 - 3561553 | 19291.9 |
| aspartyl-trna synthetase | SAMEA3472114_03464 | Not Available | Negative | 3561614 - 3563386 | 65917.2 |
| putative isochorismatase | SAMEA3472114_03465 | Not Available | Positive | 3563696 - 3564145 | 16247.5 |
| conserved protein, upf0759 family | SAMEA3472114_03466 | Not Available | Positive | 3564258 - 3565076 | 31480.8 |
| inner membrane protein | SAMEA3472114_03467 | Not Available | Positive | 3565129 - 3565524 | 15227.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





