Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysis determining protein lyda | SAMEA3472114_04569 | Not Available | Negative | 4672572 - 4672901 | 11467.2 |
| Hypothetical protein | SAMEA3472114_04570 | Not Available | Negative | 4672969 - 4673250 | 10551.9 |
| Dna invertase | SAMEA3472114_04571 | Not Available | Positive | 4673378 - 4673527 | 5488.59 |
| Tail fiber assembly protein | SAMEA3472114_04572 | Not Available | Negative | 4673671 - 4674081 | 14665.1 |
| Tail fibrer protein gps | SAMEA3472114_04573 | Not Available | Negative | 4674081 - 4678265 | 141720.0 |
| Tail fiber protein r | SAMEA3472114_04574 | Not Available | Negative | 4678277 - 4678711 | 15962.0 |
| Putative tail tube structural protein gp16 | SAMEA3472114_04575 | Not Available | Negative | 4678790 - 4679626 | 31311.4 |
| Baseplate structural protein bpla | SAMEA3472114_04576 | Not Available | Negative | 4679626 - 4681059 | 53523.3 |
| Pmga | SAMEA3472114_04577 | Not Available | Negative | 4681056 - 4681412 | 13240.7 |
| Sit | SAMEA3472114_04578 | Not Available | Negative | 4681412 - 4685101 | 130653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





