Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | SAMEA3472114_03304 | Not Available | Negative | 3409564 - 3410136 | 20769.8 |
| dihydrodipicolinate synthase | SAMEA3472114_03305 | Not Available | Positive | 3410282 - 3411160 | 31285.9 |
| lipoprotein | SAMEA3472114_03306 | Not Available | Positive | 3411177 - 3412211 | 36872.5 |
| uncharacterised protein | SAMEA3472114_03307 | Not Available | Negative | 3412122 - 3412352 | 8789.6 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMEA3472114_03308 | Not Available | Positive | 3412424 - 3413137 | 26996.5 |
| transcriptionnal regulation protein | SAMEA3472114_03309 | Not Available | Positive | 3413291 - 3413518 | 8499.05 |
| plasmid maintenance protein | SAMEA3472114_03310 | Not Available | Positive | 3413518 - 3413916 | 14895.2 |
| putative peptidase | SAMEA3472114_03311 | Not Available | Positive | 3414063 - 3414926 | 31489.1 |
| putative atp-dependent acetyltransferase | SAMEA3472114_03312 | Not Available | Positive | 3414941 - 3416956 | 74792.5 |
| esterase ypfh | SAMEA3472114_03313 | Not Available | Positive | 3417030 - 3417728 | 24801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





