Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaa family protein hda | SAMEA3472114_03284 | Not Available | Positive | 3391430 - 3392176 | 28371.4 |
| putative glutaredoxin | SAMEA3472114_03285 | Not Available | Negative | 3392314 - 3392673 | 13407.4 |
| putative peptidase | SAMEA3472114_03286 | Not Available | Negative | 3392694 - 3394157 | 53911.1 |
| putative permease | SAMEA3472114_03287 | Not Available | Positive | 3394370 - 3395431 | 39196.9 |
| formate transporter focb | SAMEA3472114_03288 | Not Available | Negative | 3395469 - 3396317 | 30619.3 |
| 2-component regulator | SAMEA3472114_03289 | Not Available | Negative | 3396339 - 3398351 | 75284.7 |
| protein processing element | SAMEA3472114_03290 | Not Available | Negative | 3398381 - 3398794 | 15534.8 |
| hydrogenase-4 subunit i | SAMEA3472114_03291 | Not Available | Negative | 3399023 - 3399544 | 18834.8 |
| hydrogenase-4 component h | SAMEA3472114_03292 | Not Available | Negative | 3399541 - 3400086 | 20161.4 |
| hydrogenase-4 subunit g | SAMEA3472114_03293 | Not Available | Negative | 3400096 - 3401763 | 63370.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





