Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein | SAMEA3472114_03263 | Not Available | Positive | 3367407 - 3368420 | 36176.5 |
| histidyl-trna synthetase | SAMEA3472114_03265 | Not Available | Positive | 3369676 - 3370950 | 47032.2 |
| conserved protein, upf0070 family | SAMEA3472114_03266 | Not Available | Positive | 3370968 - 3371588 | 22177.2 |
| putative dehydrogenase | SAMEA3472114_03267 | Not Available | Positive | 3371599 - 3372777 | 41829.5 |
| gtp-binding protein enga | SAMEA3472114_03268 | Not Available | Positive | 3372895 - 3374367 | 55039.1 |
| protein | SAMEA3472114_03269 | Not Available | Positive | 3374436 - 3374651 | 7901.64 |
| exodeoxyribonuclease 7 large subunit | SAMEA3472114_03270 | Not Available | Negative | 3374648 - 3376018 | 51863.4 |
| inosine 5'-monophosphate dehydrogenase | SAMEA3472114_03271 | Not Available | Positive | 3376180 - 3377646 | 52025.6 |
| bifunctional gmp synthase/glutamine amidotransferase protein | SAMEA3472114_03272 | Not Available | Positive | 3377715 - 3379292 | 58668.5 |
| uncharacterised protein | SAMEA3472114_03273 | Not Available | Negative | 3379387 - 3379926 | 20231.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





