Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hca operon transcriptional activator | SAMEA3472114_03241 | Not Available | Positive | 3341981 - 3342871 | 32812.2 |
| putative 3-phenylpropionate permease | SAMEA3472114_03242 | Not Available | Positive | 3343031 - 3344170 | 41595.1 |
| stationary phase inducible protein csie | SAMEA3472114_03243 | Not Available | Negative | 3344162 - 3345442 | 48978.2 |
| peptidase | SAMEA3472114_03244 | Not Available | Negative | 3345633 - 3346487 | 31517.6 |
| inositol-1-monophosphatase | SAMEA3472114_03245 | Not Available | Negative | 3346632 - 3347435 | 29173.8 |
| putative rna methyltransferase | SAMEA3472114_03246 | Not Available | Positive | 3347554 - 3348294 | 27049.6 |
| fes cluster assembly transcription factor iscr | SAMEA3472114_03247 | Not Available | Positive | 3348564 - 3349052 | 17337.6 |
| cysteine desulfurase | SAMEA3472114_03249 | Not Available | Positive | 3349164 - 3350378 | 45092.2 |
| nifu-like protein | SAMEA3472114_03250 | Not Available | Positive | 3350406 - 3350792 | 13849.3 |
| iron-sulfur cluster assembly protein | SAMEA3472114_03251 | Not Available | Positive | 3350809 - 3351132 | 11556.7 |
Pathways
882 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





