Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_04559 | Not Available | Negative | 4661941 - 4662030 | 3272.9 |
| Single-stranded dna-binding protein | SAMEA3472114_04560 | Not Available | Positive | 4662068 - 4662556 | 18101.1 |
| outer membrane porin | SAMEA3472114_04561 | Not Available | Negative | 4662790 - 4663902 | 40681.7 |
| Putative repressor protein hxr | SAMEA3472114_04562 | Not Available | Negative | 4664642 - 4664947 | 10904.5 |
| Hypothetical protein | SAMEA3472114_04563 | Not Available | Negative | 4664937 - 4667912 | 108507.0 |
| Transposase is605 | SAMEA3472114_04564 | Not Available | Positive | 4668072 - 4669220 | 43688.7 |
| Conserved protein of unknown function ddra | SAMEA3472114_04565 | Not Available | Negative | 4669260 - 4669625 | 12958.2 |
| Dara | SAMEA3472114_04566 | Not Available | Negative | 4669622 - 4671541 | 69421.8 |
| Conserved protein of unknown function hdf | SAMEA3472114_04567 | Not Available | Negative | 4671543 - 4672145 | 21787.2 |
| Lysis determining protein lydb | SAMEA3472114_04568 | Not Available | Negative | 4672132 - 4672575 | 17197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





