Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | SAMEA3472114_03198 | Not Available | Negative | 3294992 - 3295579 | 21221.4 |
| transcriptional regulator yfie | SAMEA3472114_03199 | Not Available | Positive | 3295682 - 3296563 | 33287.2 |
| atp-dependent rna helicase | SAMEA3472114_03200 | Not Available | Negative | 3296772 - 3298106 | 49901.0 |
| trna (adenine-n(6)-)-methyltransferase | SAMEA3472114_03201 | Not Available | Positive | 3298238 - 3298975 | 27167.3 |
| l-aspartate oxidase | SAMEA3472114_03202 | Not Available | Negative | 3298960 - 3300582 | 60206.7 |
| rna polymerase sigma factor rpoe | SAMEA3472114_03203 | Not Available | Positive | 3300990 - 3301565 | 21697.0 |
| sigma-e factor negative regulator | SAMEA3472114_03204 | Not Available | Positive | 3301598 - 3302248 | 24354.9 |
| sigma-e factor regulatory protein | SAMEA3472114_03205 | Not Available | Positive | 3302248 - 3303204 | 35751.8 |
| sigma-e factor regulatory protein | SAMEA3472114_03206 | Not Available | Positive | 3303201 - 3303680 | 16640.3 |
| gtp-binding protein lepa | SAMEA3472114_03207 | Not Available | Positive | 3303878 - 3305677 | 66574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





