Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease gamma subunit urea | SAMEA3472114_03145 | Not Available | Positive | 3246799 - 3247101 | 11085.7 |
| urease beta subunit ureb | SAMEA3472114_03146 | Not Available | Positive | 3247110 - 3247430 | 11762.1 |
| urease alpha subunit urec | SAMEA3472114_03147 | Not Available | Positive | 3247423 - 3249126 | 60498.2 |
| urease accessory protein uree | SAMEA3472114_03148 | Not Available | Positive | 3249136 - 3249600 | 17307.7 |
| urease accessory protein uref | SAMEA3472114_03149 | Not Available | Positive | 3249601 - 3250275 | 25156.9 |
| urease accessory protein ureg | SAMEA3472114_03150 | Not Available | Positive | 3250287 - 3250904 | 22111.6 |
| transposase family protein | SAMEA3472114_03151 | Not Available | Negative | 3251160 - 3251501 | 12755.4 |
| trat | SAMEA3472114_03152 | Not Available | Negative | 3251563 - 3251691 | 4458.75 |
| 50s ribosomal protein l31 | SAMEA3472114_03153 | Not Available | Positive | 3252115 - 3252378 | 9916.74 |
| putative membraneprotein | SAMEA3472114_03155 | Not Available | Negative | 3253691 - 3254362 | 26323.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





