Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_03135 | Not Available | Negative | 3239304 - 3239480 | 6718.01 |
| is30 transposase | SAMEA3472114_03136 | Not Available | Negative | 3239477 - 3240148 | 25817.9 |
| is600 orfab' transposase | SAMEA3472114_03137 | Not Available | Positive | 3240288 - 3241106 | 31682.9 |
| complement resistance protein | SAMEA3472114_03138 | Not Available | Positive | 3241219 - 3241758 | 19046.6 |
| putative restriction enzyme subunit beta | SAMEA3472114_03139 | Not Available | Negative | 3241806 - 3242057 | 9822.77 |
| putative restriction enzyme subunit beta | SAMEA3472114_03140 | Not Available | Negative | 3242081 - 3242371 | 10712.7 |
| diacylglycerol kinase | SAMEA3472114_03141 | Not Available | Positive | 3243057 - 3243416 | 12887.1 |
| membrane-associated, metal-dependent hydrolase | SAMEA3472114_03142 | Not Available | Negative | 3243509 - 3245128 | 61932.8 |
| uncharacterised protein | SAMEA3472114_03143 | Not Available | Negative | 3245354 - 3245629 | 10006.7 |
| urease-associated protein | SAMEA3472114_03144 | Not Available | Positive | 3246010 - 3246789 | 29146.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





