Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-binding rossmann-fold domain | SAMEA3472114_03114 | Not Available | Negative | 3209347 - 3210777 | 53710.1 |
| low specificity l-threonine aldolase | SAMEA3472114_03115 | Not Available | Negative | 3210788 - 3211789 | 36484.8 |
| pyruvate oxidase | SAMEA3472114_03116 | Not Available | Negative | 3211826 - 3213544 | 61984.9 |
| hcp oxidoreductase, nadh-dependent | SAMEA3472114_03117 | Not Available | Negative | 3213677 - 3214645 | 35741.8 |
| hydroxylamine reductase | SAMEA3472114_03118 | Not Available | Negative | 3214657 - 3216309 | 60051.3 |
| transporter | SAMEA3472114_03119 | Not Available | Negative | 3216453 - 3217352 | 32342.2 |
| aquaporin z | SAMEA3472114_03120 | Not Available | Negative | 3217847 - 3218542 | 23734.2 |
| nucleoside triphosphate hydrolase domain | SAMEA3472114_03121 | Not Available | Positive | 3218968 - 3220626 | 63507.9 |
| virulence protein | SAMEA3472114_03122 | Not Available | Negative | 3220623 - 3221615 | 38277.7 |
| macrolide-specific efflux protein | SAMEA3472114_03123 | Not Available | Positive | 3221730 - 3222845 | 40670.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





