Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil-5-)-methyltransferase | SAMEA3472114_03104 | Not Available | Positive | 3201036 - 3202163 | 41963.1 |
| arginine/ornithine abc transporter substrate-binding protein | SAMEA3472114_03105 | Not Available | Negative | 3202338 - 3203069 | 26857.9 |
| arginine abc transporter permease | SAMEA3472114_03106 | Not Available | Negative | 3203361 - 3204029 | 24915.3 |
| arginine transport system permease | SAMEA3472114_03107 | Not Available | Negative | 3204029 - 3204745 | 26218.7 |
| arginine abc transporter, substrate-binding protein | SAMEA3472114_03108 | Not Available | Negative | 3204752 - 3205483 | 26931.0 |
| arginine transport system atp-binding protein | SAMEA3472114_03109 | Not Available | Negative | 3205501 - 3206229 | 27023.7 |
| lipoprotein | SAMEA3472114_03110 | Not Available | Negative | 3206447 - 3206962 | 19055.5 |
| conserved protein, upf0145 family | SAMEA3472114_03111 | Not Available | Positive | 3207088 - 3207411 | 11437.7 |
| putative n-acetylmuramoyl-l-alanine amidase | SAMEA3472114_03112 | Not Available | Positive | 3207408 - 3208238 | 31026.1 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3472114_03113 | Not Available | Negative | 3208235 - 3209248 | 38087.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





