Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | SAMEA3472114_03094 | Not Available | Negative | 3193014 - 3193271 | 9685.35 |
| inner membrane protein | SAMEA3472114_03095 | Not Available | Positive | 3193431 - 3193718 | 10521.4 |
| nitroreductase nfsa | SAMEA3472114_03096 | Not Available | Positive | 3193702 - 3194424 | 26802.2 |
| ribosomal protein s6 modification protein | SAMEA3472114_03097 | Not Available | Positive | 3194485 - 3195387 | 32438.5 |
| tpr repeat-containing protein | SAMEA3472114_03098 | Not Available | Positive | 3195475 - 3195951 | 17667.1 |
| putrescine abc transporter substrate-binding protein | SAMEA3472114_03099 | Not Available | Positive | 3196302 - 3197414 | 40799.6 |
| putrescine abc transporter atp-binding protein | SAMEA3472114_03100 | Not Available | Positive | 3197509 - 3198642 | 41956.3 |
| putrescine abc transporter membrane protein | SAMEA3472114_03101 | Not Available | Positive | 3198652 - 3199605 | 35534.7 |
| putrescine abc transporter membrane protein | SAMEA3472114_03102 | Not Available | Positive | 3199602 - 3200447 | 30523.4 |
| inner membrane protein | SAMEA3472114_03103 | Not Available | Positive | 3200507 - 3200995 | 18519.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





