Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | SAMEA3472114_03083 | Not Available | Positive | 3183245 - 3184447 | 43643.4 |
| deoxyribose operon repressor | SAMEA3472114_03084 | Not Available | Negative | 3184494 - 3185252 | 28549.5 |
| putative phosphatase | SAMEA3472114_03085 | Not Available | Negative | 3185310 - 3185906 | 22453.9 |
| multidrug translocase mdfa | SAMEA3472114_03086 | Not Available | Positive | 3186191 - 3187423 | 44352.7 |
| protein | SAMEA3472114_03087 | Not Available | Negative | 3187464 - 3187742 | 9698.8 |
| putative hydrolase | SAMEA3472114_03088 | Not Available | Negative | 3187834 - 3188649 | 30238.0 |
| deor-type transcriptional regulator | SAMEA3472114_03089 | Not Available | Negative | 3188649 - 3189776 | 38642.9 |
| deor-type transcriptional regulator | SAMEA3472114_03090 | Not Available | Positive | 3189941 - 3190477 | 20369.6 |
| putative transport protein with two rck domains | SAMEA3472114_03092 | Not Available | Negative | 3190652 - 3192337 | 60355.1 |
| inner membrane protein ybjm | SAMEA3472114_03093 | Not Available | Positive | 3192607 - 3192984 | 14204.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





