Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transporter atp-binding protein | SAMEA3472114_03073 | Not Available | Positive | 3170038 - 3171909 | 69167.5 |
| putative binding protein ylib precursor | SAMEA3472114_03074 | Not Available | Positive | 3171929 - 3173467 | 56503.2 |
| abc transporter permease | SAMEA3472114_03075 | Not Available | Positive | 3173485 - 3174405 | 34068.5 |
| abc transporter permease | SAMEA3472114_03076 | Not Available | Positive | 3174408 - 3175319 | 33254.3 |
| cyclic di-gmp phosphodiesterase | SAMEA3472114_03077 | Not Available | Positive | 3175497 - 3177845 | 90048.7 |
| putative signaling protein | SAMEA3472114_03078 | Not Available | Positive | 3177853 - 3179181 | 49923.8 |
| radical sam superfamily protein | SAMEA3472114_03079 | Not Available | Negative | 3179228 - 3180553 | 49584.6 |
| biofilm formation regulatory protein bssr | SAMEA3472114_03080 | Not Available | Positive | 3180766 - 3181149 | 14536.6 |
| aldose sugar dehydrogenase | SAMEA3472114_03081 | Not Available | Positive | 3181260 - 3182375 | 41084.8 |
| glutathione s-transferase | SAMEA3472114_03082 | Not Available | Negative | 3182372 - 3182998 | 23714.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





