Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | SAMEA3472114_03063 | Not Available | Negative | 3157342 - 3158262 | 33327.2 |
| putative abc transporter atp-binding protein | SAMEA3472114_03064 | Not Available | Positive | 3158481 - 3160073 | 59861.4 |
| protein | SAMEA3472114_03065 | Not Available | Negative | 3160314 - 3161579 | 47331.9 |
| putative hydrolase | SAMEA3472114_03066 | Not Available | Negative | 3161731 - 3162546 | 30383.5 |
| putative formate acetyltransferase 3 (pyruvate formate lyase 3) | SAMEA3472114_03067 | Not Available | Negative | 3162692 - 3165124 | 90192.6 |
| putative pyruvate formate-lyase 3-activating enzyme | SAMEA3472114_03068 | Not Available | Negative | 3165130 - 3166029 | 33040.0 |
| fructose-6-phosphate aldolase | SAMEA3472114_03069 | Not Available | Positive | 3166160 - 3166822 | 23040.3 |
| molybdopterin biosynthesis protein | SAMEA3472114_03070 | Not Available | Negative | 3166898 - 3167647 | 26723.5 |
| molybdopterin biosynthesis protein | SAMEA3472114_03071 | Not Available | Negative | 3167647 - 3168882 | 44124.9 |
| putative l-asparaginase | SAMEA3472114_03072 | Not Available | Positive | 3169086 - 3170051 | 33396.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





