Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glnq protein, subunit of glutamine abc transporter | SAMEA3472114_03053 | Not Available | Negative | 3148259 - 3148981 | 26732.6 |
| glutamine transport system permease | SAMEA3472114_03054 | Not Available | Negative | 3148978 - 3149637 | 24365.8 |
| glutamine abc transporter, substrate-binding protein | SAMEA3472114_03055 | Not Available | Negative | 3149776 - 3150522 | 27191.5 |
| dna starvation/stationary phase protection protein dps | SAMEA3472114_03056 | Not Available | Negative | 3150926 - 3151429 | 18696.3 |
| threonine and homoserine efflux system | SAMEA3472114_03057 | Not Available | Negative | 3151728 - 3152615 | 31170.4 |
| outer membrane protein x | SAMEA3472114_03058 | Not Available | Positive | 3152968 - 3153483 | 18603.6 |
| membrane protein ybip | SAMEA3472114_03059 | Not Available | Negative | 3153532 - 3155115 | 59709.4 |
| mn(2)-response protein, mntr-repressed | SAMEA3472114_03060 | Not Available | Negative | 3155387 - 3155515 | 5031.31 |
| transcriptional regulator (manganese transport regulator) | SAMEA3472114_03061 | Not Available | Positive | 3155701 - 3156168 | 17641.3 |
| transporter | SAMEA3472114_03062 | Not Available | Positive | 3156165 - 3157283 | 41153.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





