Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | SAMEA3472114_03043 | Not Available | Positive | 3135453 - 3137738 | 86590.5 |
| putative glycosyl transferase | SAMEA3472114_03044 | Not Available | Positive | 3137766 - 3138728 | 35040.6 |
| putative dehydrogenase | SAMEA3472114_03045 | Not Available | Positive | 3138869 - 3139954 | 38899.3 |
| protein | SAMEA3472114_03046 | Not Available | Negative | 3140183 - 3140443 | 8568.2 |
| putative zinc ion binding protein | SAMEA3472114_03047 | Not Available | Negative | 3140708 - 3140974 | 9756.33 |
| hydroxylase | SAMEA3472114_03048 | Not Available | Negative | 3141048 - 3141722 | 25399.0 |
| catecholate siderophore tonb-dependent receptor | SAMEA3472114_03049 | Not Available | Negative | 3141767 - 3144049 | 81978.5 |
| protein involved in colanic acid production | SAMEA3472114_03050 | Not Available | Negative | 3144314 - 3144574 | 8896.65 |
| sam-dependent methyltransferase | SAMEA3472114_03051 | Not Available | Positive | 3144850 - 3145776 | 34227.8 |
| membrane protein ybio | SAMEA3472114_03052 | Not Available | Negative | 3145773 - 3147998 | 81908.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





