Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phospholipase | SAMEA3472114_03033 | Not Available | Negative | 3125016 - 3126257 | 47636.2 |
| putative endonuclease/exonuclease/phosphatase | SAMEA3472114_03034 | Not Available | Negative | 3126254 - 3127015 | 28791.4 |
| inner membrane protein | SAMEA3472114_03035 | Not Available | Positive | 3127148 - 3127558 | 15465.6 |
| abc transporter permease | SAMEA3472114_03036 | Not Available | Negative | 3127520 - 3128626 | 41568.2 |
| abc transporter permease | SAMEA3472114_03037 | Not Available | Negative | 3128637 - 3129770 | 42062.4 |
| abc transporter | SAMEA3472114_03038 | Not Available | Negative | 3129763 - 3131499 | 63149.3 |
| hlyd-family secretion protein | SAMEA3472114_03039 | Not Available | Negative | 3131492 - 3132487 | 36268.7 |
| tetr family transcriptional regulator | SAMEA3472114_03040 | Not Available | Negative | 3132490 - 3133161 | 25002.1 |
| atp-dependent rna helicase rhle | SAMEA3472114_03041 | Not Available | Positive | 3133390 - 3134754 | 49992.4 |
| swarming motility protein | SAMEA3472114_03042 | Not Available | Negative | 3134986 - 3135435 | 17330.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





