Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Toxin doc | SAMEA3472114_04539 | Not Available | Positive | 4639363 - 4639743 | 13616.1 |
| Pdca | SAMEA3472114_04540 | Not Available | Positive | 4639748 - 4639927 | 6776.63 |
| Hypothetical protein | SAMEA3472114_04541 | Not Available | Positive | 4639955 - 4640998 | 39776.9 |
| Late promoter-activating protein lpa | SAMEA3472114_04542 | Not Available | Positive | 4641087 - 4641539 | 18118.8 |
| Terminase a protein paca | SAMEA3472114_04543 | Not Available | Positive | 4641625 - 4642818 | 45296.4 |
| Putative large terminase protein | SAMEA3472114_04544 | Not Available | Positive | 4642818 - 4644302 | 55606.7 |
| Repressor protein c1 | SAMEA3472114_04545 | Not Available | Negative | 4644327 - 4645178 | 32501.0 |
| C1 repressor inactivator | SAMEA3472114_04546 | Not Available | Negative | 4645289 - 4645498 | 7742.8 |
| Putative cre-associated regulatory protein | SAMEA3472114_04547 | Not Available | Positive | 4646103 - 4646324 | 8662.33 |
| Recombinase | SAMEA3472114_04548 | Not Available | Positive | 4646332 - 4647363 | 38599.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





