Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 3083898 - 3083973 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3084120 - 3084195 | Not Available |
| quinolinate synthetase a | SAMEA3472114_02994 | Not Available | Positive | 3084600 - 3085643 | 38244.9 |
| nicotinamide mononucleotide transport protein | SAMEA3472114_02995 | Not Available | Positive | 3085681 - 3086400 | 26997.8 |
| zinc transporter | SAMEA3472114_02996 | Not Available | Negative | 3086397 - 3087338 | 34680.5 |
| putative homeobox protein | SAMEA3472114_02997 | Not Available | Negative | 3087452 - 3087832 | 12872.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472114_02998 | Not Available | Positive | 3088148 - 3089200 | 37997.7 |
| phosphoglyceromutase | SAMEA3472114_02999 | Not Available | Negative | 3089358 - 3090110 | 28557.9 |
| aldose 1-epimerase (mutarotase) | SAMEA3472114_03000 | Not Available | Negative | 3090315 - 3091355 | 38188.5 |
| galactokinase | SAMEA3472114_03001 | Not Available | Negative | 3091349 - 3092497 | 41444.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





