Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase beta chain with atp-grasp domain | SAMEA3472114_02972 | Not Available | Positive | 3065865 - 3067031 | 41395.1 |
| succinyl-coa ligase subunit alpha | SAMEA3472114_02973 | Not Available | Positive | 3067031 - 3067900 | 29779.3 |
| dna-binding transcriptional repressor mngr | SAMEA3472114_02974 | Not Available | Negative | 3068004 - 3068726 | 28248.9 |
| pts system 2-o-a-mannosyl-d-glycerate specific transporter subunit iiabc | SAMEA3472114_02975 | Not Available | Positive | 3068895 - 3070811 | 67077.8 |
| alpha-mannosidase | SAMEA3472114_02976 | Not Available | Positive | 3070829 - 3073462 | 100107.0 |
| cytochrome d ubiquinol oxidase subunit 1 | SAMEA3472114_02977 | Not Available | Positive | 3074309 - 3075877 | 58194.3 |
| cytochrome d ubiquinol oxidase subunit 2 | SAMEA3472114_02978 | Not Available | Positive | 3075893 - 3077032 | 42455.6 |
| cyd operon protein ybgt | SAMEA3472114_02979 | Not Available | Positive | 3077047 - 3077160 | 4041.9 |
| inner membrane protein | SAMEA3472114_02980 | Not Available | Positive | 3077160 - 3077453 | 10933.0 |
| acyl-coa thioester hydrolase | SAMEA3472114_02981 | Not Available | Positive | 3077603 - 3078007 | 15562.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





