Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3472114_02952 | Not Available | Positive | 3042641 - 3044059 | 53697.9 |
| putative oligopeptide transporter | SAMEA3472114_02953 | Not Available | Negative | 3044101 - 3045582 | 54163.1 |
| hydrolase-oxidase | SAMEA3472114_02954 | Not Available | Positive | 3045853 - 3046596 | 26894.0 |
| putative allophanate hydrolase subunit 1 | SAMEA3472114_02955 | Not Available | Positive | 3046619 - 3047275 | 23948.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3472114_02956 | Not Available | Positive | 3047269 - 3048201 | 34444.5 |
| lamb/ycsf-family protein | SAMEA3472114_02957 | Not Available | Positive | 3048191 - 3048925 | 25880.0 |
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3472114_02958 | Not Available | Positive | 3048961 - 3049752 | 29836.8 |
| transport protein abrb | SAMEA3472114_02959 | Not Available | Negative | 3049749 - 3050795 | 36839.0 |
| putative fimbrial protein | SAMEA3472114_02960 | Not Available | Negative | 3050947 - 3052008 | 39541.6 |
| chaperone, papd family | SAMEA3472114_02961 | Not Available | Negative | 3052005 - 3052736 | 27199.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





