Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transglycosylase associated protein | SAMEA3472114_02942 | Not Available | Negative | 3034423 - 3034671 | 8671.14 |
| protein | SAMEA3472114_02943 | Not Available | Negative | 3034819 - 3035001 | 6608.63 |
| tellurite resistance protein | SAMEA3472114_02944 | Not Available | Negative | 3035005 - 3035229 | 8466.96 |
| rhsc element core protein rshc | SAMEA3472114_02945 | Not Available | Positive | 3035540 - 3037522 | 75651.8 |
| inner membrane protein | SAMEA3472114_02946 | Not Available | Positive | 3037522 - 3037848 | 12558.1 |
| rhsc element core protein rshc | SAMEA3472114_02947 | Not Available | Positive | 3037966 - 3039399 | 55249.9 |
| protein | SAMEA3472114_02948 | Not Available | Positive | 3039396 - 3039965 | 21962.6 |
| transposase | SAMEA3472114_02949 | Not Available | Positive | 3040192 - 3040446 | 9567.55 |
| h repeat-associated protein | SAMEA3472114_02950 | Not Available | Positive | 3040665 - 3041708 | 39316.2 |
| photoreactivation-associated protein | SAMEA3472114_02951 | Not Available | Positive | 3042135 - 3042644 | 20212.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





