Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc-binding dehydrogenase | SAMEA3472114_02922 | Not Available | Negative | 3013203 - 3014246 | 37789.1 |
| major facilitator superfamily protein | SAMEA3472114_02923 | Not Available | Negative | 3014263 - 3015642 | 49590.9 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3472114_02924 | Not Available | Negative | 3015669 - 3016745 | 38715.9 |
| putative cytoplasmic protein | SAMEA3472114_02925 | Not Available | Negative | 3017115 - 3017387 | 10238.4 |
| methionine sulfoxide reductase b | SAMEA3472114_02926 | Not Available | Negative | 3017429 - 3017842 | 15452.0 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3472114_02927 | Not Available | Positive | 3018184 - 3019179 | 35534.5 |
| putative aldose 1-epimerase | SAMEA3472114_02928 | Not Available | Positive | 3019263 - 3020147 | 32673.8 |
| putative aldo/keto reductase | SAMEA3472114_02929 | Not Available | Negative | 3020198 - 3021052 | 30960.3 |
| mlta-interacting protein | SAMEA3472114_02930 | Not Available | Negative | 3021142 - 3021888 | 27832.4 |
| serine kinase family protein | SAMEA3472114_02931 | Not Available | Positive | 3022324 - 3024258 | 74484.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





