Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenophosphate synthetase | SAMEA3472114_02912 | Not Available | Negative | 3002378 - 3003421 | 36705.5 |
| putative nitroreductase | SAMEA3472114_02913 | Not Available | Negative | 3003538 - 3004089 | 20060.1 |
| signal peptide peptidase sppa, 67k type | SAMEA3472114_02914 | Not Available | Positive | 3004250 - 3006106 | 67252.0 |
| l-asparaginase i | SAMEA3472114_02915 | Not Available | Positive | 3006273 - 3007289 | 37044.4 |
| nicotinamidase/pyrazinamidase | SAMEA3472114_02916 | Not Available | Positive | 3007300 - 3007941 | 23394.3 |
| metabolite transport protein | SAMEA3472114_02917 | Not Available | Negative | 3008034 - 3009392 | 50268.9 |
| deor-family transcriptional regulator | SAMEA3472114_02918 | Not Available | Negative | 3009509 - 3010267 | 28252.0 |
| putative sugar reductase | SAMEA3472114_02919 | Not Available | Negative | 3010404 - 3011384 | 36372.0 |
| sugar kinase | SAMEA3472114_02920 | Not Available | Negative | 3011394 - 3012341 | 34234.3 |
| putative sugar-bisphosphate aldolase | SAMEA3472114_02921 | Not Available | Negative | 3012346 - 3013182 | 30839.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





