Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SAMEA3472114_02902 | Not Available | Positive | 2991486 - 2992652 | 42785.9 |
| abc transporter permease | SAMEA3472114_02903 | Not Available | Positive | 2992625 - 2994160 | 56330.2 |
| abc transporter atp-binding protein | SAMEA3472114_02904 | Not Available | Positive | 2994160 - 2994813 | 24069.1 |
| putative thiosulfate sulfurtransferase | SAMEA3472114_02905 | Not Available | Positive | 2994880 - 2996187 | 48205.0 |
| cytochrome oxidase | SAMEA3472114_02906 | Not Available | Negative | 2996196 - 2996816 | 22704.1 |
| ctp pyrophosphohydrolase | SAMEA3472114_02907 | Not Available | Positive | 2996903 - 2997310 | 15093.0 |
| protein | SAMEA3472114_02908 | Not Available | Negative | 2997276 - 2997548 | 9947.98 |
| nadp-specific glutamate dehydrogenase | SAMEA3472114_02909 | Not Available | Positive | 2997784 - 2999127 | 48669.4 |
| inner membrane protein | SAMEA3472114_02910 | Not Available | Negative | 2999244 - 3000284 | 40277.2 |
| dna topoisomerase iii | SAMEA3472114_02911 | Not Available | Negative | 3000412 - 3002373 | 73162.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





