Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase | SAMEA3472114_02892 | Not Available | Negative | 2981368 - 2982336 | 35787.3 |
| n-succinylarginine dihydrolase | SAMEA3472114_02893 | Not Available | Negative | 2982329 - 2983672 | 49326.3 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | SAMEA3472114_02894 | Not Available | Negative | 2983669 - 2985147 | 53076.4 |
| arginine n-succinyltransferase | SAMEA3472114_02895 | Not Available | Negative | 2985144 - 2986178 | 38429.9 |
| succinylornithine transaminase | SAMEA3472114_02896 | Not Available | Negative | 2986175 - 2987395 | 43697.8 |
| exonuclease iii | SAMEA3472114_02897 | Not Available | Positive | 2987841 - 2988647 | 30970.9 |
| inner membrane protein | SAMEA3472114_02898 | Not Available | Positive | 2988814 - 2989524 | 26078.8 |
| putative lipoprotein | SAMEA3472114_02899 | Not Available | Positive | 2989529 - 2990206 | 24144.6 |
| inner membrane protein | SAMEA3472114_02900 | Not Available | Positive | 2990221 - 2990928 | 26140.8 |
| putative decarboxylase | SAMEA3472114_02901 | Not Available | Positive | 2990928 - 2991476 | 20582.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





