Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase activator complex subunit sufb | SAMEA3472114_02828 | Not Available | Negative | 2918149 - 2919636 | 54747.2 |
| fe-s cluster assembly protein | SAMEA3472114_02829 | Not Available | Negative | 2919645 - 2920013 | 13300.9 |
| protein | SAMEA3472114_02831 | Not Available | Negative | 2920561 - 2920749 | 7266.74 |
| esterase | SAMEA3472114_02832 | Not Available | Negative | 2920849 - 2921259 | 14946.2 |
| putative fad-binding oxidase | SAMEA3472114_02833 | Not Available | Negative | 2921256 - 2924312 | 113198.0 |
| inner membrane protein | SAMEA3472114_02834 | Not Available | Positive | 2924701 - 2925813 | 39843.7 |
| ydil protein | SAMEA3472114_02836 | Not Available | Positive | 2926242 - 2926598 | 13901.6 |
| major facilitator superfamily protein | SAMEA3472114_02837 | Not Available | Positive | 2926698 - 2927912 | 44573.7 |
| major facilitator superfamily protein | SAMEA3472114_02838 | Not Available | Positive | 2928139 - 2929404 | 46036.9 |
| quinate/shikimate dehydrogenase | SAMEA3472114_02839 | Not Available | Positive | 2929416 - 2930282 | 31229.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





