Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase subunit alpha | SAMEA3472114_02807 | Not Available | Negative | 2898227 - 2898868 | 23446.3 |
| multidrug resistance protein | SAMEA3472114_02808 | Not Available | Positive | 2899083 - 2900456 | 49478.3 |
| fluffing protein | SAMEA3472114_02809 | Not Available | Negative | 2900497 - 2901753 | 42776.6 |
| Trna-val | Not Available | Not Available | Positive | 2902061 - 2902137 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2902142 - 2902218 | Not Available |
| conserved protein with fad/nad(p)-binding domain | SAMEA3472114_02813 | Not Available | Positive | 2902757 - 2904361 | 60617.3 |
| putative oxidoreductase subunit | SAMEA3472114_02814 | Not Available | Negative | 2904373 - 2905137 | 27503.0 |
| putative oxidoreductase, cytochrome b subunit | SAMEA3472114_02815 | Not Available | Negative | 2905189 - 2905974 | 29463.4 |
| putative oxidoreductase fe-s subunit | SAMEA3472114_02816 | Not Available | Negative | 2905971 - 2906639 | 25093.9 |
| putative oxidoreductase subunit | SAMEA3472114_02817 | Not Available | Negative | 2906703 - 2907341 | 24125.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





