Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | SAMEA3472114_02796 | Not Available | Positive | 2883900 - 2884547 | 23564.0 |
| atp-dependent helicase | SAMEA3472114_02797 | Not Available | Positive | 2884640 - 2889256 | 169365.0 |
| monothiol glutaredoxin ydhd | SAMEA3472114_02798 | Not Available | Negative | 2889307 - 2889654 | 12879.5 |
| putative exported hydrolase | SAMEA3472114_02799 | Not Available | Positive | 2889988 - 2890803 | 29918.2 |
| superoxide dismutase | SAMEA3472114_02800 | Not Available | Positive | 2890931 - 2891512 | 21266.8 |
| major facilitator superfamily protein | SAMEA3472114_02801 | Not Available | Negative | 2891747 - 2892916 | 40066.7 |
| purine nucleotide synthesis repressor | SAMEA3472114_02803 | Not Available | Positive | 2893470 - 2894495 | 38177.0 |
| lysr family transcriptional regulator | SAMEA3472114_02804 | Not Available | Negative | 2894492 - 2895424 | 35251.9 |
| major facilitator superfamily protein | SAMEA3472114_02805 | Not Available | Positive | 2895537 - 2896748 | 43399.9 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMEA3472114_02806 | Not Available | Positive | 2897039 - 2898187 | 43941.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





