Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | SAMEA3472114_02786 | Not Available | Negative | 2875943 - 2876377 | 16354.0 |
| inner membrane protein | SAMEA3472114_02787 | Not Available | Positive | 2876578 - 2876814 | 8891.33 |
| hlyd-family secretion protein | SAMEA3472114_02788 | Not Available | Positive | 2876817 - 2877674 | 31513.6 |
| putative efflux pump protein | SAMEA3472114_02789 | Not Available | Positive | 2877674 - 2879686 | 75271.0 |
| superoxide dismutase | SAMEA3472114_02790 | Not Available | Negative | 2879687 - 2880208 | 17682.0 |
| putative aldo/keto reductase | SAMEA3472114_02791 | Not Available | Negative | 2880289 - 2881185 | 33707.6 |
| putative fe-s protein | SAMEA3472114_02792 | Not Available | Negative | 2881234 - 2881473 | 9359.15 |
| tetr family transcriptional regulator | SAMEA3472114_02793 | Not Available | Positive | 2881576 - 2882175 | 22276.7 |
| n-ethylmaleimide reductase | SAMEA3472114_02794 | Not Available | Positive | 2882212 - 2883309 | 39532.7 |
| glyoxalase i | SAMEA3472114_02795 | Not Available | Positive | 2883390 - 2883797 | 14920.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





