Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine deaminase | SAMEA3472114_02766 | Not Available | Positive | 2857785 - 2858786 | 36369.6 |
| oxidoreductase | SAMEA3472114_02767 | Not Available | Negative | 2858821 - 2859861 | 38244.5 |
| h-ns-and stpa-binding protein | SAMEA3472114_02768 | Not Available | Positive | 2860502 - 2860717 | 8417.05 |
| inner membrane protein | SAMEA3472114_02769 | Not Available | Positive | 2860803 - 2861243 | 16337.5 |
| electron transport complex protein rnfa | SAMEA3472114_02770 | Not Available | Positive | 2861320 - 2861901 | 20898.8 |
| electron transport complex protein | SAMEA3472114_02771 | Not Available | Positive | 2861901 - 2862479 | 20544.9 |
| putative transport protein | SAMEA3472114_02772 | Not Available | Positive | 2862472 - 2864694 | 80241.9 |
| electron transport complex protein | SAMEA3472114_02773 | Not Available | Positive | 2864695 - 2865753 | 38126.4 |
| electron transport complex protein | SAMEA3472114_02774 | Not Available | Positive | 2865757 - 2866377 | 21943.2 |
| electron transport complex protein | SAMEA3472114_02775 | Not Available | Positive | 2866381 - 2867076 | 24460.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





