Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3472114_02736 | Not Available | Negative | 2824426 - 2825319 | 33297.4 |
| major facilitator superfamily protein | SAMEA3472114_02737 | Not Available | Positive | 2825426 - 2826679 | 45260.2 |
| acid shock protein | SAMEA3472114_02738 | Not Available | Positive | 2827103 - 2827411 | 10490.6 |
| putative protease | SAMEA3472114_02739 | Not Available | Positive | 2827687 - 2828508 | 29252.6 |
| multidrug resistance protein | SAMEA3472114_02740 | Not Available | Negative | 2828547 - 2828876 | 11720.8 |
| multidrug resistance protein | SAMEA3472114_02741 | Not Available | Negative | 2828863 - 2829228 | 13143.7 |
| transporter | SAMEA3472114_02742 | Not Available | Positive | 2829640 - 2830674 | 37545.3 |
| nad(p) transhydrogenase subunit beta | SAMEA3472114_02743 | Not Available | Negative | 2830699 - 2832087 | 48722.1 |
| nad(p) transhydrogenase subunit alpha | SAMEA3472114_02744 | Not Available | Negative | 2832098 - 2833630 | 54578.5 |
| protein ydgh | SAMEA3472114_02745 | Not Available | Positive | 2834154 - 2835098 | 33874.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





