Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative holliday junction resolvase | SAMEA3472114_02631 | Not Available | Positive | 2731135 - 2731551 | 15187.2 |
| twitching motility family protein | SAMEA3472114_02632 | Not Available | Negative | 2731714 - 2732694 | 35875.2 |
| putative amino acid racemase | SAMEA3472114_02633 | Not Available | Positive | 2732712 - 2733416 | 25788.9 |
| membrane protein yggt | SAMEA3472114_02634 | Not Available | Positive | 2733434 - 2734000 | 21168.5 |
| conserved protein, upf0235 family | SAMEA3472114_02635 | Not Available | Positive | 2733997 - 2734287 | 10429.8 |
| deoxyribonucleotide triphosphate pyrophosphatase | SAMEA3472114_02636 | Not Available | Positive | 2734295 - 2734888 | 20964.9 |
| putative oxygen-independent coproporphyrinogen iii oxidase | SAMEA3472114_02637 | Not Available | Positive | 2734881 - 2736017 | 42521.6 |
| putative alpha helix chain | SAMEA3472114_02638 | Not Available | Negative | 2736172 - 2737179 | 38475.4 |
| l-asparaginase 2 | SAMEA3472114_02639 | Not Available | Negative | 2737296 - 2738342 | 36837.7 |
| protein | SAMEA3472114_02640 | Not Available | Negative | 2738518 - 2739237 | 26430.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





