Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA3472114_02621 | Not Available | Negative | 2720681 - 2721412 | 26389.8 |
| arginine decarboxylase | SAMEA3472114_02622 | Not Available | Negative | 2721558 - 2723534 | 73890.6 |
| inner membrane protein | SAMEA3472114_02623 | Not Available | Negative | 2724022 - 2724273 | 9562.84 |
| s-adenosylmethionine synthetase | SAMEA3472114_02624 | Not Available | Positive | 2724329 - 2725483 | 41900.9 |
| galactose-proton symporter | SAMEA3472114_02625 | Not Available | Positive | 2725919 - 2727313 | 50985.6 |
| protein sprt | SAMEA3472114_02626 | Not Available | Positive | 2727432 - 2727887 | 17784.6 |
| endonuclease i | SAMEA3472114_02627 | Not Available | Positive | 2727982 - 2728689 | 26710.5 |
| 16s ribosomal rna methyltransferase rsme | SAMEA3472114_02628 | Not Available | Positive | 2728769 - 2729500 | 26979.7 |
| glutathione synthetase | SAMEA3472114_02629 | Not Available | Positive | 2729513 - 2730463 | 35563.0 |
| protein yqge | SAMEA3472114_02630 | Not Available | Positive | 2730500 - 2731135 | 23349.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





