Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose transport system kinase | SAMEA3472114_02611 | Not Available | Negative | 2710719 - 2711432 | 26759.9 |
| putative transcriptional regulator | SAMEA3472114_02612 | Not Available | Negative | 2711429 - 2711938 | 19175.8 |
| putative sugar-bisphosphatase | SAMEA3472114_02613 | Not Available | Negative | 2711960 - 2712925 | 34323.5 |
| putative oxidoreductase | SAMEA3472114_02614 | Not Available | Negative | 2712922 - 2713692 | 27141.6 |
| putative oxidoreductase | SAMEA3472114_02615 | Not Available | Negative | 2713831 - 2714199 | 13451.2 |
| mannitol-specific cryptic pts system eiicb component | SAMEA3472114_02616 | Not Available | Negative | 2714214 - 2715602 | 48988.1 |
| mannitol-specific cryptic pts system iiia component | SAMEA3472114_02617 | Not Available | Negative | 2715630 - 2716073 | 16047.1 |
| transketolase | SAMEA3472114_02618 | Not Available | Negative | 2716387 - 2718378 | 72215.7 |
| peptidase | SAMEA3472114_02619 | Not Available | Positive | 2718661 - 2719419 | 26800.8 |
| agmatinase | SAMEA3472114_02620 | Not Available | Negative | 2719625 - 2720545 | 33558.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





