Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine exporter | SAMEA3472114_02601 | Not Available | Negative | 2701781 - 2702416 | 23203.1 |
| mechanosensitive channel mscs | SAMEA3472114_02602 | Not Available | Negative | 2702555 - 2703415 | 30897.9 |
| fructose-bisphosphate aldolase | SAMEA3472114_02603 | Not Available | Negative | 2703773 - 2704852 | 39149.4 |
| phosphoglycerate kinase | SAMEA3472114_02604 | Not Available | Negative | 2705067 - 2706230 | 41120.5 |
| erythrose 4-phosphate dehydrogenase | SAMEA3472114_02605 | Not Available | Negative | 2706280 - 2707299 | 37301.5 |
| dna-binding protein | SAMEA3472114_02606 | Not Available | Positive | 2707671 - 2708102 | 15523.7 |
| abc-type transport system | SAMEA3472114_02607 | Not Available | Positive | 2708125 - 2708703 | 20155.8 |
| abc transporter permease | SAMEA3472114_02608 | Not Available | Positive | 2708704 - 2709411 | 26802.4 |
| abc transporter atp-binding protein | SAMEA3472114_02609 | Not Available | Positive | 2709399 - 2710076 | 25062.3 |
| abc transporter atp-binding protein | SAMEA3472114_02610 | Not Available | Positive | 2710070 - 2710747 | 24927.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





