Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMEA3472114_02591 | Not Available | Negative | 2690786 - 2692018 | 44178.4 |
| ribose-5-phosphate isomerase a | SAMEA3472114_02592 | Not Available | Negative | 2692274 - 2692933 | 22861.8 |
| lysr family transcriptional regulator | SAMEA3472114_02593 | Not Available | Negative | 2692989 - 2693219 | 8388.54 |
| chromosome initiation inhibitor | SAMEA3472114_02594 | Not Available | Positive | 2693361 - 2694254 | 33473.6 |
| methylmalonyl-coa mutase | SAMEA3472114_02595 | Not Available | Positive | 2694458 - 2696602 | 77926.6 |
| lao/ao transport system kinase | SAMEA3472114_02596 | Not Available | Positive | 2696595 - 2697590 | 36731.2 |
| methylmalonyl-coa decarboxylase | SAMEA3472114_02597 | Not Available | Positive | 2697601 - 2698386 | 29174.3 |
| putative acetyl-coa hydrolase/transferase | SAMEA3472114_02598 | Not Available | Positive | 2698410 - 2699888 | 53843.6 |
| dna-binding transcriptional regulator | SAMEA3472114_02599 | Not Available | Negative | 2699885 - 2700781 | 34575.6 |
| oxidative stress defense protein | SAMEA3472114_02600 | Not Available | Negative | 2700948 - 2701688 | 26636.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





