Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-binding oxidoreductase with nad(p)-binding rossmann-fold domain | SAMEA3472114_02578 | Not Available | Negative | 2678376 - 2679119 | 25994.1 |
| glycine dehydrogenase | SAMEA3472114_02579 | Not Available | Negative | 2679385 - 2682258 | 104366.0 |
| glycine cleavage system protein h | SAMEA3472114_02580 | Not Available | Negative | 2682376 - 2682765 | 13811.8 |
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3472114_02581 | Not Available | Negative | 2682789 - 2683883 | 40091.0 |
| putative monooxygenase | SAMEA3472114_02582 | Not Available | Negative | 2684331 - 2685533 | 44154.1 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMEA3472114_02583 | Not Available | Negative | 2685556 - 2686734 | 42386.9 |
| proline aminopeptidase ii | SAMEA3472114_02584 | Not Available | Negative | 2686731 - 2688056 | 49772.1 |
| yeca family protein | SAMEA3472114_02585 | Not Available | Negative | 2688082 - 2688660 | 21230.8 |
| z-ring-associated protein | SAMEA3472114_02586 | Not Available | Positive | 2688828 - 2689157 | 12594.9 |
| 5,10-methenyltetrahydrofolate synthetase | SAMEA3472114_02588 | Not Available | Positive | 2689403 - 2690005 | 23242.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





