Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rha family transcriptional regulator | SAMEA3472114_03929 | Not Available | Negative | 4022653 - 4022895 | 9242.27 |
| P2 ci-like protein | SAMEA3472114_03930 | Not Available | Positive | 4023017 - 4023649 | 23072.9 |
| Integrase | SAMEA3472114_03931 | Not Available | Positive | 4023652 - 4024668 | 38245.4 |
| Dcmp deaminase | SAMEA3472114_03932 | Not Available | Negative | 4025050 - 4026783 | 66080.4 |
| Attr | Not Available | Not Available | Positive | 4027853 - 4027865 | Not Available |
| putative prophage protein | SAMEA3472114_04159 | Not Available | Positive | 4257820 - 4258557 | 28169.1 |
| putative prophage regulatory protein | SAMEA3472114_04160 | Not Available | Positive | 4258670 - 4258873 | 7563.26 |
| putative prophage protein | SAMEA3472114_04161 | Not Available | Positive | 4258873 - 4259304 | 16394.7 |
| Antirepressor | SAMEA3472114_04162 | Not Available | Positive | 4259317 - 4260150 | 31061.2 |
| putative prophage protein | SAMEA3472114_04163 | Not Available | Positive | 4260143 - 4260325 | 6891.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





